Split glass report into three tables
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Dwi Swandhana
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@@ -549,6 +549,298 @@ class ReportController extends Controller
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->pluck('rekapantibiotik.antibiotic')
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->pluck('rekapantibiotik.antibiotic')
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->toArray();
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->toArray();
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}
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}
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private function getGlassReportHeaders() {
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$tableC = [
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'ID Rumah Sakit',
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'Nama Pasien',
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'No Rekam Medis',
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'Jenis Kelamin',
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'Tanggal Lahir',
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'Usia',
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'Ruang Rawat',
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'Tanggal Pasien Masuk',
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'Tanggal Pengambilan Spesimen',
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'Specimen Origin',
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'Jenis Spesimen',
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];
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$tableAAntibiotics = [
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'Cefoxitin',
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'Oxacillin',
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'Penicillin',
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'Ampicillin',
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'Amoxicillin',
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'Cefazolin',
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'Cefuroxime',
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'Cefixime',
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'Cefotaxime',
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'Ceftriaxone',
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'Ceftazidime',
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'Cefepime',
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'Ceftaroline',
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'Ertapenem',
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'Imipenem',
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'Meropenem',
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'Aztreonam',
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'Amoxicillin-clavulanate',
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'Ampicillin-sulbactam',
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'Piperacillin-tazobactam',
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'Ceftazidime-avibactam',
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'Gentamicin',
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'Amikacin',
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'Ciprofloxacin',
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'Levofloxacin',
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'Moxifloxacin',
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'Trimethoprim-sulfamethoxazole',
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'Azithromycin',
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'Clarithromycin',
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'Erythromycin',
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'Clindamycin',
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'Tetracycline',
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'Minocycline',
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'Doxycycline',
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'Colistin',
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'Vancomycin',
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'Linezolid',
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'Tigecycline',
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'Daptomycin',
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'Nitrofurantoin',
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'Fosfomycin',
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];
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$tableBAntibiotics = [
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'Fluconazole',
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'Voriconazole',
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'Amphotericin B',
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'Micafungin',
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'Caspofungin',
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'Flucytosine',
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];
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return [
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'A' => array_merge($tableC, ['Nama Spesies Bakteri', 'ESBL', 'MRSA'], $tableAAntibiotics),
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'B' => array_merge($tableC, ['Nama Spesies Jamur'], $tableBAntibiotics),
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'C' => $tableC,
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'A_antibiotics' => $tableAAntibiotics,
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'B_antibiotics' => $tableBAntibiotics,
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];
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}
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private function getGlassReportAntibioticAliases() {
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return [
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'Cefoxitin' => ['cefoxitin', 'cefoxitinscreen'],
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'Oxacillin' => ['oxacillin'],
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'Penicillin' => ['penicillin', 'benzylpenicillin'],
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'Ampicillin' => ['ampicillin'],
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'Amoxicillin' => ['amoxicillin'],
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'Cefazolin' => ['cefazolin', 'cefazolinurine', 'cefazolinother'],
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'Cefuroxime' => ['cefuroxime', 'cefuroximeiv', 'cefuroximeoral'],
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'Cefixime' => ['cefixime'],
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'Cefotaxime' => ['cefotaxime'],
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'Ceftriaxone' => ['ceftriaxone'],
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'Ceftazidime' => ['ceftazidime'],
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'Cefepime' => ['cefepime'],
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'Ceftaroline' => ['ceftaroline'],
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'Ertapenem' => ['ertapenem'],
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'Imipenem' => ['imipenem'],
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'Meropenem' => ['meropenem'],
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'Aztreonam' => ['aztreonam'],
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'Amoxicillin-clavulanate' => ['amoxicillinclavulanate', 'amoxicillinclavulanicacid'],
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'Ampicillin-sulbactam' => ['ampicillinsulbactam'],
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'Piperacillin-tazobactam' => ['piperacillintazobactam'],
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'Ceftazidime-avibactam' => ['ceftazidimeavibactam'],
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'Gentamicin' => ['gentamicin'],
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'Amikacin' => ['amikacin'],
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'Ciprofloxacin' => ['ciprofloxacin'],
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'Levofloxacin' => ['levofloxacin'],
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'Moxifloxacin' => ['moxifloxacin'],
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'Trimethoprim-sulfamethoxazole' => ['trimethoprimsulfamethoxazole', 'trimetrophimesulfamethoxazole'],
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'Azithromycin' => ['azithromycin'],
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'Clarithromycin' => ['clarithromycin'],
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'Erythromycin' => ['erythromycin'],
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'Clindamycin' => ['clindamycin'],
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'Tetracycline' => ['tetracycline', 'tetracyclinescreenonly', 'tetracyclineu'],
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'Minocycline' => ['minocycline'],
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'Doxycycline' => ['doxycycline'],
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'Colistin' => ['colistin'],
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'Vancomycin' => ['vancomycin'],
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'Linezolid' => ['linezolid'],
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'Tigecycline' => ['tigecycline'],
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'Daptomycin' => ['daptomycin'],
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'Nitrofurantoin' => ['nitrofurantoin'],
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'Fosfomycin' => ['fosfomycin'],
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'Fluconazole' => ['fluconazole'],
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'Voriconazole' => ['voriconazole'],
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'Amphotericin B' => ['amphotericinb'],
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'Micafungin' => ['micafungin'],
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'Caspofungin' => ['caspofungin'],
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'Flucytosine' => ['flucytosine'],
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];
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}
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private function normalizeGlassReportValue($value) {
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return preg_replace('/[^a-z0-9]+/', '', strtolower(strip_tags((string) $value)));
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}
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private function pickGlassReportResistanceValue($row, $header) {
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$rawResistance = $row->resistence ?? $row->resistance ?? null;
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$rawInterpretation = $row->interpretation ?? null;
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$resistance = trim((string) $rawResistance);
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$interpretation = trim((string) $rawInterpretation);
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if ($resistance === '') {
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return $interpretation;
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}
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$normalizedResistance = $this->normalizeGlassReportValue($resistance);
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$normalizedAntibiotic = $this->normalizeGlassReportValue($row->antibiotic ?? '');
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$normalizedHeader = $this->normalizeGlassReportValue($header);
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if ($normalizedResistance === $normalizedAntibiotic || $normalizedResistance === $normalizedHeader) {
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return $interpretation;
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}
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return $resistance;
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}
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private function getGlassReportOrigin($row) {
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if (empty($row->daftar) || empty($row->mulai)) {
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return '';
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}
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try {
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$selisihHari = Carbon::parse($row->daftar)->diffInDays(Carbon::parse($row->mulai));
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return $selisihHari >= 3 ? 'Hospital Origin' : 'Community Origin';
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} catch (\Throwable $e) {
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return '';
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}
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}
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private function buildGlassReportBaseRow($row) {
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$jenisSpesimen = trim(implode(' ', array_filter([
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$row->kd_spesimen ?? '',
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$row->nm_spesimen ?? '',
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])));
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return [
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$row->nmrs ?? '',
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$row->nmpasien ?? '',
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$row->noregister ?? '',
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$row->jkpasien ?? '',
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$row->tgllahirpasien ?? '',
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$row->usia ?? '',
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$row->asalpasien ?? '',
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$row->daftar ?? '',
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$row->mulai ?? '',
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$this->getGlassReportOrigin($row),
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$jenisSpesimen,
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];
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}
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private function getGlassReportLookups($rows) {
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$orderIds = $rows->pluck('id')->filter()->values()->all();
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$accnumbers = $rows->pluck('nofoto')->filter()->values()->all();
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$komponen = DB::table('db_komponenjawaban')
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->select('accnumber', 'komponen', 'isidata')
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->whereIn('accnumber', $accnumbers)
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->whereIn('komponen', ['bakteri', 'id_bakteri01', 'id_bakteri02', 'id_mikroorganisme'])
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->whereNotNull('isidata')
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->where('isidata', '!=', '')
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->get()
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->groupBy('accnumber');
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$antibiotik = RekapAntibiotik::query()
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->whereIn('orderid', $orderIds)
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->get(['orderid', 'antibiotic', 'resistance', 'interpretation'])
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->groupBy('orderid');
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return [
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'komponen' => $komponen,
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'antibiotik' => $antibiotik,
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];
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}
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private function splitGlassReportRows($rows, $lookups) {
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$headers = $this->getGlassReportHeaders();
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$aliases = $this->getGlassReportAntibioticAliases();
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$tables = ['A' => [], 'B' => [], 'C' => []];
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foreach ($rows as $row) {
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$baseRow = $this->buildGlassReportBaseRow($row);
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$komponenRows = $lookups['komponen'][$row->nofoto] ?? collect([]);
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$antibioticRows = $lookups['antibiotik'][$row->id] ?? collect([]);
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$bacterialName = '';
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$fungalName = '';
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$foundMorphology = false;
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foreach ($komponenRows as $komponenRow) {
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$value = trim(strip_tags((string) $komponenRow->isidata));
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if ($value === '') {
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continue;
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}
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if (stripos($value, 'Ditemukan morfologi') !== false) {
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$foundMorphology = true;
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}
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if (in_array($komponenRow->komponen, ['bakteri', 'id_bakteri01', 'id_bakteri02'], true) && $bacterialName === '' && stripos($value, 'Ditemukan morfologi') === false) {
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$bacterialName = $value;
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}
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if ($komponenRow->komponen === 'id_mikroorganisme' && $fungalName === '') {
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$fungalName = $value;
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}
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}
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$antibioticValues = [];
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foreach ($antibioticRows as $antibioticRow) {
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$matchedHeader = null;
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$normalizedAntibiotic = $this->normalizeGlassReportValue($antibioticRow->antibiotic ?? '');
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$normalizedResistance = $this->normalizeGlassReportValue($antibioticRow->resistance ?? '');
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foreach ($aliases as $header => $variants) {
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if (in_array($normalizedAntibiotic, $variants, true) || in_array($normalizedResistance, $variants, true)) {
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$matchedHeader = $header;
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break;
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}
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}
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if ($matchedHeader === null || isset($antibioticValues[$matchedHeader])) {
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continue;
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}
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$antibioticValues[$matchedHeader] = $this->pickGlassReportResistanceValue($antibioticRow, $matchedHeader);
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}
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$hasJenisSpesimen = trim((string) ($baseRow[10] ?? '')) !== '';
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if ($bacterialName !== '' && $hasJenisSpesimen) {
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$tableRow = array_merge($baseRow, [
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$bacterialName,
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$row->id_esbl ?? '',
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$row->id_mrsa ?? '',
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]);
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foreach ($headers['A_antibiotics'] as $antibioticHeader) {
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$tableRow[] = $antibioticValues[$antibioticHeader] ?? '';
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}
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$tables['A'][] = $tableRow;
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continue;
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}
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if ($foundMorphology || $fungalName !== '') {
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$tableRow = array_merge($baseRow, [
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$fungalName !== '' ? $fungalName : 'Ditemukan morfologi',
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]);
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foreach ($headers['B_antibiotics'] as $antibioticHeader) {
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$tableRow[] = $antibioticValues[$antibioticHeader] ?? '';
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}
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$tables['B'][] = $tableRow;
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continue;
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}
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$tables['C'][] = $baseRow;
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}
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return $tables;
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}
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public function genGlassReport(Request $request) {
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public function genGlassReport(Request $request) {
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$bulan = $request->input('bulan');
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$bulan = $request->input('bulan');
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$tahun = $request->input('tahun');
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$tahun = $request->input('tahun');
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@@ -574,11 +866,16 @@ class ReportController extends Controller
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// 2. Ambil Data Antibiotik HANYA untuk 50 pasien tersebut
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// 2. Ambil Data Antibiotik HANYA untuk 50 pasien tersebut
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$pageIds = $orderbydate->pluck('id')->toArray();
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$pageIds = $orderbydate->pluck('id')->toArray();
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$antibiotikLookup = $this->mapAntibiotikData($pageIds);
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$antibiotikLookup = $this->mapAntibiotikData($pageIds);
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$glassLookups = $this->getGlassReportLookups($orderbydate->getCollection());
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$glassTables = $this->splitGlassReportRows($orderbydate->getCollection(), $glassLookups);
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$glassHeaders = $this->getGlassReportHeaders();
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return view('admin.glassreport', [
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return view('admin.glassreport', [
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'orderbydate' => $orderbydate,
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'orderbydate' => $orderbydate,
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'antibiotikLookup' => $antibiotikLookup, // Kirim array hasil mapping
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'antibiotikLookup' => $antibiotikLookup, // Kirim array hasil mapping
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'jsonantibiotik' => $this->listAntibiotik,
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'jsonantibiotik' => $this->listAntibiotik,
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'glassTables' => $glassTables,
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'glassHeaders' => $glassHeaders,
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'bulan' => $bulan,
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'bulan' => $bulan,
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'tahun' => $tahun
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'tahun' => $tahun
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]);
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]);
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@@ -600,10 +897,12 @@ class ReportController extends Controller
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$response = new StreamedResponse(function() use ($bulan, $tahun) {
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$response = new StreamedResponse(function() use ($bulan, $tahun) {
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$handle = fopen('php://output', 'w');
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$handle = fopen('php://output', 'w');
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$headers = $this->getGlassReportHeaders();
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// Header CSV
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$tables = [
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$staticHeader = ['ID RS', 'Nama Pasien', 'No RM', 'JK', 'Tgl Lahir', 'Usia', 'Ruang', 'Tgl Masuk', 'Tgl Sample', 'Origin', 'Jenis Spesimen', 'Spesies Bakteri', 'ESBL', 'MRSA'];
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'A' => [],
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fputcsv($handle, array_merge($staticHeader, $this->listAntibiotik));
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'B' => [],
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'C' => [],
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];
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// Query Tanpa Get() tapi Chunk()
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// Query Tanpa Get() tapi Chunk()
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$query = Periksa::query()->whereYear('daftar', $tahun);
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$query = Periksa::query()->whereYear('daftar', $tahun);
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@@ -612,39 +911,28 @@ class ReportController extends Controller
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}
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}
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// Proses per 500 data agar RAM stabil
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// Proses per 500 data agar RAM stabil
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$query->chunk(500, function($rows) use ($handle) {
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$query->orderBy('id')->chunk(500, function($rows) use (&$tables) {
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$lookups = $this->getGlassReportLookups($rows);
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// Mapping Antibiotik untuk batch 500 ini saja
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$chunkTables = $this->splitGlassReportRows($rows, $lookups);
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$chunkIds = $rows->pluck('id')->toArray();
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$antibiotikLookup = $this->mapAntibiotikData($chunkIds);
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foreach ($rows as $row) {
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foreach (['A', 'B', 'C'] as $tableKey) {
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$csvRow = [
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foreach ($chunkTables[$tableKey] as $tableRow) {
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$row->id_rs ?? '', // Sesuaikan nama kolom
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$tables[$tableKey][] = $tableRow;
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$row->nmpasien,
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}
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$row->noregister,
|
}
|
||||||
$row->jkpasien,
|
|
||||||
$row->tgllahirpasien,
|
|
||||||
$row->usia,
|
|
||||||
$row->asalpasien,
|
|
||||||
$row->mulai,
|
|
||||||
$row->daftar,
|
|
||||||
'', // Origin
|
|
||||||
$row->kd_spesimen,
|
|
||||||
$row->nm_spesimen, // Asumsi nama bakteri disini atau kolom lain
|
|
||||||
$row->id_esbl,
|
|
||||||
$row->id_mrsa
|
|
||||||
];
|
|
||||||
|
|
||||||
foreach ($this->listAntibiotik as $headerAntibiotik) {
|
|
||||||
$nilai = $antibiotikLookup[$row->id][$headerAntibiotik] ?? '';
|
|
||||||
$csvRow[] = $nilai;
|
|
||||||
}
|
|
||||||
|
|
||||||
fputcsv($handle, $csvRow);
|
|
||||||
}
|
|
||||||
});
|
});
|
||||||
|
|
||||||
|
foreach (['A', 'B', 'C'] as $tableKey) {
|
||||||
|
fputcsv($handle, ['TABEL '.$tableKey]);
|
||||||
|
fputcsv($handle, $headers[$tableKey]);
|
||||||
|
|
||||||
|
foreach ($tables[$tableKey] as $tableRow) {
|
||||||
|
fputcsv($handle, $tableRow);
|
||||||
|
}
|
||||||
|
|
||||||
|
fputcsv($handle, []);
|
||||||
|
}
|
||||||
|
|
||||||
fclose($handle);
|
fclose($handle);
|
||||||
});
|
});
|
||||||
|
|
||||||
|
|||||||
@@ -9,52 +9,41 @@
|
|||||||
<div class="ribbon ribbon-danger">Rekapitulasi Data Bulan {{$bulan}} Tahun {{$tahun}}</div>
|
<div class="ribbon ribbon-danger">Rekapitulasi Data Bulan {{$bulan}} Tahun {{$tahun}}</div>
|
||||||
<p></p>
|
<p></p>
|
||||||
<div class="mt-3 mb-3">
|
<div class="mt-3 mb-3">
|
||||||
<a href="{{ route('exportGlassReport', ['bulan' => $bulan, 'tahun' => $tahun]) }}" class="btn btn-success">
|
<a href="{{ route('exportGlassReport', ['bulan' => $bulan, 'tahun' => $tahun]) }}" class="btn btn-success">
|
||||||
<i class="fa fa-file-excel-o"></i> Download Full Excel (CSV)
|
<i class="fa fa-file-excel-o"></i> Download Full Excel (CSV)
|
||||||
</a>
|
</a>
|
||||||
</div>
|
</div>
|
||||||
|
|
||||||
<div class="table-responsive">
|
@foreach (['A', 'B', 'C'] as $tableKey)
|
||||||
<table class="table table-bordered" id="datatable">
|
<div class="table-responsive" style="margin-bottom: 24px;">
|
||||||
<thead>
|
<h4>TABEL {{ $tableKey }}</h4>
|
||||||
<tr>
|
<table class="table table-bordered table-sm">
|
||||||
<th>Nama Pasien</th>
|
<thead>
|
||||||
<th>No RM</th>
|
|
||||||
<th>Bakteri</th>
|
|
||||||
@foreach($jsonantibiotik as $antibiotic)
|
|
||||||
<th title="{{ $antibiotic }}">{{ $antibiotic }}</th>
|
|
||||||
@endforeach
|
|
||||||
</tr>
|
|
||||||
</thead>
|
|
||||||
<tbody>
|
|
||||||
@forelse($orderbydate as $data)
|
|
||||||
<tr>
|
<tr>
|
||||||
<td>{{ $data->nmpasien }}</td>
|
@foreach (($glassHeaders[$tableKey] ?? []) as $header)
|
||||||
<td>{{ $data->noregister }}</td>
|
<th>{{ $header }}</th>
|
||||||
<td>{{ $data->nm_spesimen }}</td> @foreach($jsonantibiotik as $headerAntibiotik)
|
|
||||||
@php
|
|
||||||
// LOGIC UTAMA:
|
|
||||||
// Cek di array lookup: [id_pasien][nama_antibiotik]
|
|
||||||
// Jika ada, ambil nilainya. Jika tidak, kosong.
|
|
||||||
$interpretasi = $antibiotikLookup[$data->id][$headerAntibiotik] ?? '';
|
|
||||||
@endphp
|
|
||||||
<td class="text-center" style="{{ $interpretasi == 'R' ? 'background-color:#ffcccc' : '' }}">
|
|
||||||
{{ $interpretasi }}
|
|
||||||
</td>
|
|
||||||
@endforeach
|
@endforeach
|
||||||
</tr>
|
</tr>
|
||||||
@empty
|
</thead>
|
||||||
<tr>
|
<tbody>
|
||||||
<td colspan="{{ count($jsonantibiotik) + 3 }}">Data tidak ditemukan</td>
|
@forelse (($glassTables[$tableKey] ?? []) as $row)
|
||||||
</tr>
|
<tr>
|
||||||
@endforelse
|
@foreach ($row as $cell)
|
||||||
</tbody>
|
<td>{{ $cell }}</td>
|
||||||
</table>
|
@endforeach
|
||||||
</div>
|
</tr>
|
||||||
|
@empty
|
||||||
|
<tr>
|
||||||
|
<td colspan="{{ count($glassHeaders[$tableKey] ?? []) }}">Data tidak ditemukan</td>
|
||||||
|
</tr>
|
||||||
|
@endforelse
|
||||||
|
</tbody>
|
||||||
|
</table>
|
||||||
|
</div>
|
||||||
|
@endforeach
|
||||||
</div>
|
</div>
|
||||||
</div>
|
</div>
|
||||||
</div>
|
</div>
|
||||||
</div>
|
</div>
|
||||||
</div>
|
</div>
|
||||||
@endsection
|
@endsection
|
||||||
@@ -629,7 +629,7 @@ $(document).ready(function () {
|
|||||||
type : 'error',
|
type : 'error',
|
||||||
});
|
});
|
||||||
} else {
|
} else {
|
||||||
var url = '{{url('/')}}/glassreport?bulan='+bulan+'?tahun='+tahun;
|
var url = '{{url('/')}}/glassreport?bulan='+bulan+'&tahun='+tahun;
|
||||||
window.location.href = url;
|
window.location.href = url;
|
||||||
}
|
}
|
||||||
});
|
});
|
||||||
|
|||||||
+105
-7
@@ -402,6 +402,27 @@ def create_genexpert_ack_r01_response(incoming_hl7):
|
|||||||
msa = f"MSA|CA|{incoming_control_id}"
|
msa = f"MSA|CA|{incoming_control_id}"
|
||||||
return f"{msh}\r{msa}\r"
|
return f"{msh}\r{msa}\r"
|
||||||
|
|
||||||
|
def format_hl7_date(value):
|
||||||
|
if not value:
|
||||||
|
return ""
|
||||||
|
if isinstance(value, datetime.datetime):
|
||||||
|
return value.strftime("%Y%m%d")
|
||||||
|
if isinstance(value, datetime.date):
|
||||||
|
return value.strftime("%Y%m%d")
|
||||||
|
text = str(value).strip()
|
||||||
|
digits = re.sub(r"[^0-9]", "", text)
|
||||||
|
return digits[:8] if len(digits) >= 8 else ""
|
||||||
|
|
||||||
|
def map_hl7_sex(value):
|
||||||
|
text = str(value or "").strip().upper()
|
||||||
|
if not text:
|
||||||
|
return ""
|
||||||
|
if text.startswith("L") or "LAKI" in text or text == "M":
|
||||||
|
return "M"
|
||||||
|
if text.startswith("P") or "PEREM" in text or text == "F":
|
||||||
|
return "F"
|
||||||
|
return ""
|
||||||
|
|
||||||
def create_genexpert_rsp_z02_response(orders, incoming_hl7, ip_addr=None):
|
def create_genexpert_rsp_z02_response(orders, incoming_hl7, ip_addr=None):
|
||||||
qpd_segment = extract_segment(incoming_hl7, "QPD")
|
qpd_segment = extract_segment(incoming_hl7, "QPD")
|
||||||
qpd = parse_genexpert_qpd(qpd_segment)
|
qpd = parse_genexpert_qpd(qpd_segment)
|
||||||
@@ -417,25 +438,45 @@ def create_genexpert_rsp_z02_response(orders, incoming_hl7, ip_addr=None):
|
|||||||
segments.append(qpd_segment)
|
segments.append(qpd_segment)
|
||||||
|
|
||||||
for patient_idx, order in enumerate(orders, start=1):
|
for patient_idx, order in enumerate(orders, start=1):
|
||||||
patient_id = str(order.norm or order.rnoreg or "").strip()
|
patient_id = sanitize_astm_field(order.norm or order.rnoreg, max_len=50)
|
||||||
sample_id = str(order.rnoreg or "").strip()
|
sample_id = sanitize_astm_field(order.rnoreg, max_len=50)
|
||||||
order_ts = datetime.datetime.now().strftime('%Y%m%d%H%M%S')
|
order_ts = (
|
||||||
|
getattr(order, "rtglast", None).strftime('%Y%m%d%H%M%S')
|
||||||
|
if getattr(order, "rtglast", None)
|
||||||
|
else datetime.datetime.now().strftime('%Y%m%d%H%M%S')
|
||||||
|
)
|
||||||
assay_code, assay_source, capability_match = resolve_genexpert_assay(order, ip_addr)
|
assay_code, assay_source, capability_match = resolve_genexpert_assay(order, ip_addr)
|
||||||
if not assay_code:
|
if not assay_code:
|
||||||
print(f"[GENEXPERT] Payload order dilewati rnoreg={sample_id} karena assay kosong.")
|
print(f"[GENEXPERT] Payload order dilewati rnoreg={sample_id} karena assay kosong.")
|
||||||
continue
|
continue
|
||||||
|
|
||||||
|
first_name, last_name = split_patient_name(order.nama)
|
||||||
|
patient_name = sanitize_astm_field(f"{last_name}^{first_name}", uppercase=True, max_len=80, allow_component_sep=True)
|
||||||
|
dob = format_hl7_date(getattr(order, "tgllahir", None))
|
||||||
|
sex = map_hl7_sex(getattr(order, "rjenis", ""))
|
||||||
|
address = sanitize_astm_field(getattr(order, "alamat", ""), max_len=120)
|
||||||
|
room = sanitize_astm_field(getattr(order, "ruangan", ""), uppercase=True, max_len=80)
|
||||||
|
doctor = sanitize_astm_field(getattr(order, "namadok", ""), max_len=80)
|
||||||
|
requested_test_name = sanitize_astm_field(getattr(order, "tes", ""), max_len=120)
|
||||||
|
specimen_type = sanitize_astm_field(
|
||||||
|
getattr(order, "nm_spesimen", "") or getattr(order, "kd_spesimen", "") or "ORH",
|
||||||
|
uppercase=True,
|
||||||
|
max_len=40
|
||||||
|
)
|
||||||
|
|
||||||
print(
|
print(
|
||||||
f"[GENEXPERT-DEBUG] Build RSP rnoreg={sample_id}, ip={ip_addr}, "
|
f"[GENEXPERT-DEBUG] Build RSP rnoreg={sample_id}, ip={ip_addr}, "
|
||||||
f"patient_id={patient_id}, assay_code={assay_code}, assay_source={assay_source}, "
|
f"patient_id={patient_id}, assay_code={assay_code}, assay_source={assay_source}, "
|
||||||
f"capability_match={capability_match}, query_name='{query_name}', query_tag='{query_tag}'"
|
f"capability_match={capability_match}, patient_name='{patient_name}', dob='{dob}', "
|
||||||
|
f"sex='{sex}', room='{room}', doctor='{doctor}', specimen_type='{specimen_type}', "
|
||||||
|
f"requested_test_name='{requested_test_name}', query_name='{query_name}', query_tag='{query_tag}'"
|
||||||
)
|
)
|
||||||
|
|
||||||
segments.append(f"PID|{patient_idx}||{patient_id}")
|
segments.append(f"PID|{patient_idx}||{patient_id}||{patient_name}||{dob}|{sex}|||{address}")
|
||||||
segments.append(f"ORC|NW|1|||||||{order_ts}")
|
segments.append(f"ORC|NW|1|||||||{order_ts}")
|
||||||
segments.append(f"OBR|1|||{assay_code}|||||||A")
|
segments.append(f"OBR|1|||{assay_code}^{requested_test_name}^L|||||||A")
|
||||||
segments.append("TQ1|||||||||R")
|
segments.append("TQ1|||||||||R")
|
||||||
segments.append(f"SPM|1|{sample_id}^||ORH|||||||P")
|
segments.append(f"SPM|1|{sample_id}^{sample_id}||{specimen_type}|||||||P")
|
||||||
|
|
||||||
return "\r".join(segments) + "\r"
|
return "\r".join(segments) + "\r"
|
||||||
|
|
||||||
@@ -456,6 +497,7 @@ def send_all_orders(conn, ip_addr, hl7_msg, msg_id, response_framing="mllp"):
|
|||||||
print(f"[GENEXPERT] Mengirim {len(orders)} order ke {ip_addr}")
|
print(f"[GENEXPERT] Mengirim {len(orders)} order ke {ip_addr}")
|
||||||
rsp = create_genexpert_rsp_z02_response(orders, hl7_msg, ip_addr=ip_addr)
|
rsp = create_genexpert_rsp_z02_response(orders, hl7_msg, ip_addr=ip_addr)
|
||||||
first_accnumber = str(orders[0].rnoreg or "").strip() if orders else ""
|
first_accnumber = str(orders[0].rnoreg or "").strip() if orders else ""
|
||||||
|
debug_genexpert_order_message(rsp, ip_addr=ip_addr)
|
||||||
send_genexpert_response(conn, ip_addr, rsp, response_framing, label=f"qbp-order:{first_accnumber}")
|
send_genexpert_response(conn, ip_addr, rsp, response_framing, label=f"qbp-order:{first_accnumber}")
|
||||||
|
|
||||||
for order in orders:
|
for order in orders:
|
||||||
@@ -553,6 +595,62 @@ def send_genexpert_response(conn, ip_addr, hl7_message, framing, label=""):
|
|||||||
)
|
)
|
||||||
conn.sendall(payload)
|
conn.sendall(payload)
|
||||||
|
|
||||||
|
def debug_genexpert_order_message(hl7_message, ip_addr=None):
|
||||||
|
segments = parse_hl7_segments(hl7_message)
|
||||||
|
current_pid = ""
|
||||||
|
current_patient_name = ""
|
||||||
|
order_index = 0
|
||||||
|
|
||||||
|
for segment in segments:
|
||||||
|
fields = segment.split("|")
|
||||||
|
seg_type = fields[0] if fields else ""
|
||||||
|
|
||||||
|
if seg_type == "PID":
|
||||||
|
current_pid = fields[3] if len(fields) > 3 else ""
|
||||||
|
current_patient_name = fields[5] if len(fields) > 5 else ""
|
||||||
|
dob = fields[7] if len(fields) > 7 else ""
|
||||||
|
sex = fields[8] if len(fields) > 8 else ""
|
||||||
|
address = fields[11] if len(fields) > 11 else ""
|
||||||
|
print(
|
||||||
|
f"[GENEXPERT-ORDER-DEBUG] ip={ip_addr}, seg=PID, patient_id='{current_pid}', "
|
||||||
|
f"patient_name='{current_patient_name}', dob='{dob}', sex='{sex}', "
|
||||||
|
f"address='{address}', raw='{segment}'"
|
||||||
|
)
|
||||||
|
elif seg_type == "ORC":
|
||||||
|
order_index = fields[2] if len(fields) > 2 else ""
|
||||||
|
order_time = fields[9] if len(fields) > 9 else ""
|
||||||
|
print(
|
||||||
|
f"[GENEXPERT-ORDER-DEBUG] ip={ip_addr}, seg=ORC, placer_order='{order_index}', "
|
||||||
|
f"order_time='{order_time}', patient_id='{current_pid}', "
|
||||||
|
f"patient_name='{current_patient_name}', raw='{segment}'"
|
||||||
|
)
|
||||||
|
elif seg_type == "OBR":
|
||||||
|
assay_code = fields[4] if len(fields) > 4 else ""
|
||||||
|
result_status = fields[11] if len(fields) > 11 else ""
|
||||||
|
assay_parts = assay_code.split("^")
|
||||||
|
assay_id = assay_parts[0] if len(assay_parts) > 0 else ""
|
||||||
|
assay_name = assay_parts[1] if len(assay_parts) > 1 else ""
|
||||||
|
print(
|
||||||
|
f"[GENEXPERT-ORDER-DEBUG] ip={ip_addr}, seg=OBR, placer_order='{order_index}', "
|
||||||
|
f"assay_code='{assay_id}', assay_name='{assay_name}', result_status='{result_status}', "
|
||||||
|
f"patient_id='{current_pid}', patient_name='{current_patient_name}', raw='{segment}'"
|
||||||
|
)
|
||||||
|
elif seg_type == "TQ1":
|
||||||
|
priority = fields[9] if len(fields) > 9 else ""
|
||||||
|
print(
|
||||||
|
f"[GENEXPERT-ORDER-DEBUG] ip={ip_addr}, seg=TQ1, placer_order='{order_index}', "
|
||||||
|
f"priority='{priority}', patient_id='{current_pid}', "
|
||||||
|
f"patient_name='{current_patient_name}', raw='{segment}'"
|
||||||
|
)
|
||||||
|
elif seg_type == "SPM":
|
||||||
|
specimen_id = fields[2] if len(fields) > 2 else ""
|
||||||
|
specimen_type = fields[4] if len(fields) > 4 else ""
|
||||||
|
print(
|
||||||
|
f"[GENEXPERT-ORDER-DEBUG] ip={ip_addr}, seg=SPM, placer_order='{order_index}', "
|
||||||
|
f"specimen_id='{specimen_id}', specimen_type='{specimen_type}', patient_id='{current_pid}', "
|
||||||
|
f"patient_name='{current_patient_name}', raw='{segment}'"
|
||||||
|
)
|
||||||
|
|
||||||
def build_genexpert_result_query(accnumber, msg_control_id):
|
def build_genexpert_result_query(accnumber, msg_control_id):
|
||||||
ts = datetime.datetime.now().strftime('%Y%m%d%H%M%S')
|
ts = datetime.datetime.now().strftime('%Y%m%d%H%M%S')
|
||||||
# Query hasil berbasis accession number di QRD-8.
|
# Query hasil berbasis accession number di QRD-8.
|
||||||
|
|||||||
Reference in New Issue
Block a user